Detailed information of evm.model.Ap3.131 in Astrangia poculata

Genomic Location: Ap3:1288483...1293271
NR annotation: XP_020618698.1, LON peptidase N-terminal domain and RING finger protein 2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
D3YY23LON peptidase N-terminal domain and RING finger protein 1 OS=Mus musculus OX=10090 GN=Lonrf1 PE=1 SV=2
Q496Y0LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens OX=9606 GN=LONRF3 PE=1 SV=1
Q17RB8LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens OX=9606 GN=LONRF1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07719TPR_2Tetratricopeptide repeatRepeatInterproscan
PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR003111DomainLon protease, N-terminal domainInterproscan
IPR013105RepeatTetratricopeptide repeat 2Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23327RING FINGER PROTEIN 127Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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