Detailed information of evm.model.Ap3.1350 in Astrangia poculata

Genomic Location: Ap3:15410420...15432075
NR annotation: XP_020601842.1, SMC5-SMC6 complex localization factor protein 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BQI6SMC5-SMC6 complex localization factor protein 1 OS=Homo sapiens OX=9606 GN=SLF1 PE=1 SV=2
A6QR20SMC5-SMC6 complex localization factor protein 1 OS=Bos taurus OX=9913 GN=SLF1 PE=2 SV=2
Q8R3P9SMC5-SMC6 complex localization factor protein 1 OS=Mus musculus OX=10090 GN=Slf1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR049936DomainDNA topoisomerase 2-binding protein 1, eighth BRCT domainInterproscan
IPR042479FamilySMC5-SMC6 complex localization factor protein 1Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR001357DomainBRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46677SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:1990166Biological Processprotein localization to site of double-strand breakInterproscan
GO:2000781Biological Processpositive regulation of double-strand break repairInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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