Detailed information of evm.model.Ap3.1408 in Astrangia poculata

Genomic Location: Ap3:16092504...16113125
NR annotation: XP_020621221.1, nesprin-1-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3ZHV2Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1
Q9QXZ0Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2
Q9UPN3Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR043197FamilyPlakinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23169ENVOPLAKINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005882Cellular Componentintermediate filamentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042060Biological Processwound healingInterproscan
GO:0045104Biological Processintermediate filament cytoskeleton organizationInterproscan

TOP