Gene detail

Detailed information of evm.model.Ap3.216 in Astrangia poculata

Genomic Location: Ap3:2130980...2139538
NR annotation: XP_020622493.1, coronin-6-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9WUM4	Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2
B0R0D7	Coronin-1C-A OS=Danio rerio OX=7955 GN=coro1ca PE=2 SV=1
Q9ULV4	Coronin-1C OS=Homo sapiens OX=9606 GN=CORO1C PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF16300	WD40_4	Type of WD40 repeat	Repeat	Interproscan
PF08953	DUF1899	Domain of unknown function (DUF1899)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015048	Domain	Domain of unknown function DUF1899	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015505	Family	Coronin	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10856	CORONIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13886	CORO1B_1C_6; coronin-1B/1C/6	-	Cytoskeleton proteins	ko04812	deepkoala