Gene detail

Detailed information of evm.model.Ap3.559 in Astrangia poculata

Genomic Location: Ap3:5716485...5717294
NR annotation: KAJ7333716.1, hypothetical protein OS493_015799 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q08237	RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1
Q6CMT3	RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=REX4 PE=3 SV=1
Q6FQA0	RNA exonuclease 4 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=REX4 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR047021	Family	RNA exonuclease REXO1/REXO3/REXO4-like	Interproscan
IPR037431	Domain	RNA exonuclease 4, DEDDh 3'-5' exonuclease domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004527	Molecular Function	exonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0008408	Molecular Function	3'-5' exonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18340	AEN, ISG20L1; apoptosis-enhancing nuclease	EC:3.1.-.-	DNA repair and recombination proteins	ko03400	deepkoala