Detailed information of evm.model.Ap3.582 in Astrangia poculata

Genomic Location: Ap3:6031540...6072993
NR annotation: PFX19425.1, Collagen alpha-5(VI) chain [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21941Matrilin-1 OS=Homo sapiens OX=9606 GN=MATN1 PE=1 SV=1
P51942Matrilin-1 OS=Mus musculus OX=10090 GN=Matn1 PE=2 SV=2
Q6UXI7Vitrin OS=Homo sapiens OX=9606 GN=VIT PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635CUB DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06238COL6A; collagen type VI alpha-Glycosaminoglycan binding proteinsko00536deepkoala

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