Gene detail

Detailed information of evm.model.Ap3.834 in Astrangia poculata

Genomic Location: Ap3:8957610...8964994
NR annotation: XP_027037057.1, uncharacterized protein LOC113665542 [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P18887	DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3
O54935	DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1
Q60596	DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01834	XRCC1_N	XRCC1 N terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006642	Domain	Rad18, zinc finger UBZ4-type	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR002706	Domain	DNA-repair protein Xrcc1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11370	DNA-REPAIR PROTEIN XRCC1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0000012	Biological Process	single strand break repair	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10803	XRCC1; DNA-repair protein XRCC1	-	DNA repair and recombination proteins	ko03400	deepkoala