Detailed information of evm.model.Ap4.1271 in Astrangia poculata

Genomic Location: Ap4:13110450...13128005
NR annotation: CAH3118116.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
O35764Neuronal pentraxin receptor OS=Rattus norvegicus OX=10116 GN=Nptxr PE=1 SV=1
Q99J85Neuronal pentraxin receptor OS=Mus musculus OX=10090 GN=Nptxr PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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