Gene detail

Detailed information of evm.model.Ap4.1313 in Astrangia poculata

Genomic Location: Ap4:13601636...13615717
NR annotation: XP_020601139.1, uncharacterized protein LOC110040264 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A6H8Y1	Transcription factor TFIIIB component B'' homolog OS=Homo sapiens OX=9606 GN=BDP1 PE=1 SV=3
Q571C7	Transcription factor TFIIIB component B'' homolog OS=Mus musculus OX=10090 GN=Bdp1 PE=2 SV=2
O94481	Transcription factor TFIIIB component B'' OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bdp1 PE=3 SV=2

Gene family	Subfamily
Transcription Factors Family	MYB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15963	Myb_DNA-bind_7	Myb DNA-binding like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR039467	Domain	Transcription factor TFIIIB component B'', Myb domain	Interproscan
IPR001005	Domain	SANT/Myb domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22929	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000126	Cellular Component	transcription factor TFIIIB complex	Interproscan
GO:0001156	Molecular Function	TFIIIC-class transcription factor complex binding	Interproscan
GO:0070898	Biological Process	RNA polymerase III preinitiation complex assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15198	BDP1, TFC5; transcription factor TFIIIB component B''	-	Transcription machinery	ko03021	deepkoala