Gene detail

Detailed information of evm.model.Ap4.1714.1.5f15e08a in Astrangia poculata

Genomic Location: Ap4:17269980...17289522
NR annotation: XP_022792501.1, kinesin-II 95 kDa subunit-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.Ap4.1714.1.5f15e08a

tcgagcaagaaggcaggcgagtctgtgaaggtcgttgtgagatgccggccaatgaatgagaaggaaatagcccagggacatcgaagaataatagagatgaacgtcaagaaagggacaattgagatcaccaacccagccaagaaagaggataccccacgcatgttcacctacgattcagtttatgactggaactcaaaacagattgatctctatgatgaaacatttcgacagttagtggactctgtacttgaagggtataatggtacaatttttgcttacgggcaaacaggaacaggaaaaacattcaccatggaaggtgtacgatcagaccctgtgttaagaggggtgataccaaactcgtttgaacatatctttacacacatagccaggacagagaatcagcagtatttggtccgagcttcataccttgaaatttaccaggaggatatcagggatttattatctaaagaccagagtaaaagactggagctaaaggaaagaccagatactggggtgtatgtcaaggatcttcagtcgtttgtatgtaaaagtgtgaaggagattgaacatgttatgaacgttggaaatcagaaccgatcagtaggggcaaccaatatgaacgagcattcttcaagatcccatgccatcttcatcattactattgaatgcagtgagcctggggcagacggtgagagccatattcgggttggcaaactcaacatggtggacttagctggcagtgaaaggcaggccaagacgggtgctacgggggatagactaaaggaagctactaaaatcaacctttcgctgtccgctcttggcaatgtaatatctgcattagtggatggtaaaagcacccatattccttacagagattccaagctaacaagactattacaagattctttgggaggaaacgcaagaacagttatggttgccaacattggtcctgcgagctataattttgaggagacaataacgacattaagatacgcaaaccgagccaagaatatcaagaataaaccccatattaacgaagaccccaaggatgccttgctgagagaatttcaagaggagattgctaagttaaagatagagctggaaaggcgcggtggaggaggaacgaagaaaaagaaaagaagacaaagagagaatggttccgtagtcgaagaagaagaggaagaaggcgaggaaggagcagagccgagcacggaagataaaatcaaacttgaacaagctaaacttgaagaagacaagaaggcgctgcaggataaccactctatgatggcagaggaaaaagaaaaacttatgaatgaaattcagaagagagcacaccagttgaaaaagcaacaagaagcacaatcagccctgaaatcaaaaatcaaaatgatggaaagtaaattgttagttggcggaaagagcattatcgacaaaaccactgaacaggagcgagcgctggaggaacgaagaaaacagattgctgaacaacagcgccgtgaaagagagatgcaacaaaaactcgaagaaaaggacgaaaataccgtggaaataaaggaaacgttctcgtcacttcaacaagaagtagatagcaaaactaagaaactgaaaaagctttttggcaagttacagacaattcggtcggagatcgctgaccagcaagaagcgcatattcaggaaagacaggaattggaacaggcgcaagaggacctcactagggaactgaaactaaaaacgttaataatagagaacttcattcctccagacgaaagaaacaaactaacaaacagagcgagttatgatgaagagaacgaagaatggaagttgaaaccttcctctcagaatagcagtcagcaagctatggccaagagaccagtatcagcagttggtaacagacgacccatcactgagtatgcgaaaatggcggcagccatgggtggacacatgagatacaaggtatatacaactgccgtaaaatttcggttataa

Transcript

evm.model.Ap4.1714.1.5f15e08a

GTCGAGCAAGAAGGCAGGCGAGTCTGTGAAGGTCGTTGTGAGATGCCGGCCAATGAATGAGAAGGAAATAGCCCAGGGACATCGAAGAATAATAGAGATGAACGTCAAGAAAGGGACAATTGAGATCACCAACCCAGCCAAGAAAGAGGATACCCCACGCATGTTCACCTACGATTCAGTTTATGACTGGAACTCAAAACAGATTGATCTCTATGATGAAACATTTCGACAGTTAGTGGACTCTGTACTTGAAGGGTATAATGGTACAATTTTTGCTTACGGGCAAACAGGAACAGGAAAAACATTCACCATGGAAGGTGTACGATCAGACCCTGTGTTAAGAGGGGTGATACCAAACTCGTTTGAACATATCTTTACACACATAGCCAGGACAGAGAATCAGCAGTATTTGGTCCGAGCTTCATACCTTGAAATTTACCAGGAGGATATCAGGGATTTATTATCTAAAGACCAGAGTAAAAGACTGGAGCTAAAGGAAAGACCAGATACTGGGGTGTATGTCAAGGATCTTCAGTCGTTTGTATGTAAAAGTGTGAAGGAGATTGAACATGTTATGAACGTTGGAAATCAGAACCGATCAGTAGGGGCAACCAATATGAACGAGCATTCTTCAAGATCCCATGCCATCTTCATCATTACTATTGAATGCAGTGAGCCTGGGGCAGACGGTGAGAGCCATATTCGGGTTGGCAAACTCAACATGGTGGACTTAGCTGGCAGTGAAAGGCAGGCCAAGACGGGTGCTACGGGGGATAGACTAAAGGAAGCTACTAAAATCAACCTTTCGCTGTCCGCTCTTGGCAATGTAATATCTGCATTAGTGGATGGTAAAAGCACCCATATTCCTTACAGAGATTCCAAGCTAACAAGACTATTACAAGATTCTTTGGGAGGAAACGCAAGAACAGTTATGGTTGCCAACATTGGTCCTGCGAGCTATAATTTTGAGGAGACAATAACGACATTAAGATACGCAAACCGAGCCAAGAATATCAAGAATAAACCCCATATTAACGAAGACCCCAAGGATGCCTTGCTGAGAGAATTTCAAGAGGAGATTGCTAAGTTAAAGATAGAGCTGGAAAGGCGCGGTGGAGGAGGAACGAAGAAAAAGAAAAGAAGACAAAGAGAGAATGGTTCCGTAGTCGAAGAAGAAGAGGAAGAAGGCGAGGAAGGAGCAGAGCCGAGCACGGAAGATAAAATCAAACTTGAACAAGCTAAACTTGAAGAAGACAAGAAGGCGCTGCAGGATAACCACTCTATGATGGCAGAGGAAAAAGAAAAACTTATGAATGAAATTCAGAAGAGAGCACACCAGTTGAAAAAGCAACAAGAAGCACAATCAGCCCTGAAATCAAAAATCAAAATGATGGAAAGTAAATTGTTAGTTGGCGGAAAGAGCATTATCGACAAAACCACTGAACAGGAGCGAGCGCTGGAGGAACGAAGAAAACAGATTGCTGAACAACAGCGCCGTGAAAGAGAGATGCAACAAAAACTCGAAGAAAAGGACGAAAATACCGTGGAAATAAAGGAAACGTTCTCGTCACTTCAACAAGAAGTAGATAGCAAAACTAAGAAACTGAAAAAGCTTTTTGGCAAGTTACAGACAATTCGGTCGGAGATCGCTGACCAGCAAGAAGCGCATATTCAGGAAAGACAGGAATTGGAACAGGCGCAAGAGGACCTCACTAGGGAACTGAAACTAAAAACGTTAATAATAGAGAACTTCATTCCTCCAGACGAAAGAAACAAACTAACAAACAGAGCGAGTTATGATGAAGAGAACGAAGAATGGAAGTTGAAACCTTCCTCTCAGAATAGCAGTCAGCAAGCTATGGCCAAGAGACCAGTATCAGCAGTTGGTAACAGACGACCCATCACTGAGTATGCGAAAATGGCGGCAGCCATGGGTGGACACATGAGATACAAGGTATATACAACTGCCGTAAAATTTCGGTTATAA

Protein

Uniprot

Uniprot term	Description
P46871	Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus OX=7668 GN=KRP95 PE=1 SV=1
O15066	Kinesin-like protein KIF3B OS=Homo sapiens OX=9606 GN=KIF3B PE=1 SV=1
Q61771	Kinesin-like protein KIF3B OS=Mus musculus OX=10090 GN=Kif3b PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005875	Cellular Component	microtubule associated complex	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0051231	Biological Process	spindle elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20196	KIF3B; kinesin family member 3B	-	Cytoskeleton proteins	ko04812	deepkoala