Detailed information of evm.model.Ap4.6203 in Astrangia poculata

Genomic Location: Ap4:46202801...46211984
NR annotation: KAJ7388759.1, Cartilage intermediate layer protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4TU93C-type mannose receptor 2 OS=Rattus norvegicus OX=10116 GN=Mrc2 PE=1 SV=1
P49301C-type lectin domain family 10 member A OS=Rattus norvegicus OX=10116 GN=Clec10a PE=1 SV=1
Q64449C-type mannose receptor 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan
IPR000742DomainEGF-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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