Detailed information of evm.model.Ap4.6833_evm.model.Ap4.6834 in Astrangia poculata

Genomic Location: Ap4:52909515...52922672
NR annotation: XP_020625377.1, geranylgeranyl transferase type-2 subunit alpha-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5A779Geranylgeranyl transferase type-2 subunit alpha OS=Sus scrofa OX=9823 GN=RABGGTA PE=2 SV=1
Q5EA80Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus OX=9913 GN=RABGGTA PE=2 SV=1
Q92696Geranylgeranyl transferase type-2 subunit alpha OS=Homo sapiens OX=9606 GN=RABGGTA PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07711RabGGT_insertRab geranylgeranyl transferase alpha-subunit, insert domain DomainInterproscan
PF01239PPTAProtein prenyltransferase alpha subunit repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002088RepeatProtein prenyltransferase, alpha subunitInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036254Homologous_superfamilyRab geranylgeranyltransferase, alpha subunit, insert-domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR009087DomainRab geranylgeranyltransferase, alpha subunit, insert-domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008318Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342Biological Processprotein prenylationInterproscan
GO:0004663Molecular FunctionRab geranylgeranyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005968Cellular ComponentRab-protein geranylgeranyltransferase complexInterproscan
GO:0018344Biological Processprotein geranylgeranylationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14050RABGGTA; geranylgeranyl transferase type-2 subunit alphaEC:2.5.1.60
Membrane traffickingko04131deepkoala

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