Gene detail

Detailed information of evm.model.Ap4.7284 in Astrangia poculata

Genomic Location: Ap4:57672230...57676100
NR annotation: XP_020631316.1, NAD-dependent deacetylase sir2A-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

evm.model.Ap4.7284

AATTCGAGTTTTCTCGACTATCCTGAACTTCGTTGCATCGATCGAGCTTCAACAGATGATAAGGAAAGAAGAAACCATGGCTTTCTCCAATCTTCAAGCGATGTTCAAGTTAGCTCAAAGACCAACTCATACAATCAGCGACAGAGAGGGCGAAGAATTTGAGGTCAAATCGGACGCAAAAGATGCACTGTTGATTGTTAAAAACTGCACCGACTGTCATGCAAGCTTACAAGAGAAAGCTGCTAAGTTGCTCGTGCAGAGCTGCAATAACTTCGTGCTGGACATGAAATCTACCCTGATTTCTGGTACACTCGAATTTCTGTCATGCAAAAAAGTTGTAGTGAACTTGCTTGAAGGTGGTCAGATTCCAATTATTATGGCTGATAGCACCACTGATCTGACTGTCAATGTACTACAACATTCTCAATTAGAATCTCTGTATCTCCACCAGTCAAGTAACATTGAAGTCTGTGTACTTGGAGAAAACCCTTCAAAACACCCAGTGTCTTTCCCAGCAGACGTTCCTCAGCATCTACAGTTTATTGCTCACTGGGAGAAAGAGGGAGAAGAACAGAAGCTTATTTGTGAGAAGGTTGTGAGGGAAGGTGTGTTCCCCACTACAGAACGTAAAATGAAAGAGGCTCAAGAAAGAACAGAAAGAGACCTGGAGAAAATGGCGTCTGCTCTTGTGGACAGTATCAAGATCACACCTAAAGGGCAAGAGAAAGATAAACCAAGCCCTGGAAAGGAGGCAGAAGGCTCATCAGGCTCACCTTCAACAAAACCACCCTCAGTAAAACCCAGAGGAGATGCACCTAGACCTCATCACAATATTGAGGATGAAGATGACAAAAAAGAGTTTTTTGACTCACCAGAAGAACTGGAGAAAAAGATTGATCTTCTTGCAAAATGGGTTAAAGAGAGCAAACACTGTGTGATGTTCACAGGTGCCGGCATAAGCACAAGCACTGGAATCCCAGATTTCCGAAGTGGCATGAACACTGTGCTGAAGACAGGCCCAGGTGTGTGGGAGCTGCAAGCCAAGGGGGTTGCTCGCAAACCAGGTGCAGCCCTTCCAAATATGTTAAAAGCAATACCCTCCCCTGCCCACATGGCCATAGTGAAGTTGCACAAGGAGGGGCTGATCAAGTTCACTGTGAGCCAAAATGTTGATGGTCTCCACTTACGCAGTGGCATCCCTAGTAATGAGCTTGCCGAACTTCATGGGAACACCAACCTGGAGAAGTGCACCACATGTGGTGCTAAATATTTGAGAGACTTTGACACACGCACTGCCAGGAGAGTTTATGACCACCTTACTGGAAGATTCTGCGATAATGCCAAGTGCCGTGGGCCACTGGTAGACTCCATCATAAACTTTGGGGAGAGTCTTCCAACTGAGGAATTGGAAAATTCTTACCAAGAAGCAAAGAAGTTGGACCTGATTATTGTGCTTGGATCCAGCCTTCAGGTGTATCCTGCAGCTGACATTCCAGCCACTGCTGTCCGTCGTAAACAGAAGCTGGTGATATGCAATCTGCAAAAGACACCACTCAGTGCTAAGAGTGCCCTTCAGATACACAGCCAGATAGATAAAGTGATGAAAGGGCTTTTGGAGAGGCTTGGCTTGGAGATACCGCCCTTTAGTGTACGCCGCCGCTTTGCTGTTGATACAAGCCAAGATAAAATCTTGATACAAGGCCTTGATATAGAATGTGACACACCATATTCATTCTTCAAGCAAGTGTCTGTGCGTGTGTCTCAGGAAGTTAAGGGGTCAAAGAAAGTCGTAGCTGAAAAAATCCTAACTAAGGAGCCTCTGGAAATGCATTTCAACCAGAGCCTGGATATCTCAGAAGCCAACCCACTGGTTGCCGACATAGAGTTAGGTTTCCATGGTCATTACGGTGAACCGAGCATGTCATTCAGTGATTCTATTACATGCCTTGGGAAGACTCTGTTCTGCGCAGAGTATGATCTCACTACAGGGCAGTGGTCACTGCAAAAATACTGA

Protein

Uniprot

Uniprot term	Description
Q9FE17	NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana OX=3702 GN=SRT1 PE=1 SV=1
Q7XWV4	NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. japonica OX=39947 GN=SRT1 PE=1 SV=2
B8ARK7	NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica OX=39946 GN=SRT1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08603	CAP_C	Adenylate cyclase associated (CAP) C terminal	Family	Interproscan
PF02146	SIR2	Sir2 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050134	Family	NAD-dependent sirtuin protein deacylases	Interproscan
IPR029035	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan
IPR013912	Domain	Adenylate cyclase-associated CAP, C-terminal	Interproscan
IPR003000	Family	Sirtuin family	Interproscan
IPR016098	Homologous_superfamily	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Interproscan
IPR026590	Domain	Sirtuin family, catalytic core domain	Interproscan
IPR036223	Homologous_superfamily	Adenylate cyclase-associated CAP, C-terminal superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11085	NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0007010	Biological Process	cytoskeleton organization	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11416	SIRT6, SIR2L6; NAD-dependent protein deacetylase sirtuin 6	EC:2.3.1.286	Chromosome and associated proteins	ko03036	deepkoala