Gene detail

Detailed information of evm.model.Ap5.1347 in Astrangia poculata

Genomic Location: Ap5:14663711...14668558
NR annotation: KAJ7386081.1, hypothetical protein OS493_012421 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0P5B3	Rhombotin-1 OS=Bos taurus OX=9913 GN=LMO1 PE=2 SV=1
Q503U0	LIM domain only protein 3 OS=Danio rerio OX=7955 GN=lmo3 PE=2 SV=1
Q99MB5	LIM domain only protein 3 OS=Rattus norvegicus OX=10116 GN=Lmo3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR050945	Family	LMO/RBTN Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45787	LD11652P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0140297	Molecular Function	DNA-binding transcription factor binding	Interproscan