Detailed information of evm.model.Ap5.1919 in Astrangia poculata

Genomic Location: Ap5:20470161...20473652
NR annotation: XP_031553550.1, peroxidasin homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V8T4Contactin-associated protein like 5-3 OS=Rattus norvegicus OX=10116 GN=Cntnap5c PE=2 SV=1
Q0V8T0Contactin-associated protein-like 5 OS=Canis lupus familiaris OX=9615 GN=CNTNAP5 PE=2 SV=1
Q0V8T7Contactin-associated protein like 5-3 OS=Mus musculus OX=10090 GN=Cntnap5c PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

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