Detailed information of evm.model.Ap5.2166 in Astrangia poculata

Genomic Location: Ap5:22713515...22749868
NR annotation: CAH3113790.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8QG64E3 ubiquitin-protein ligase RBX1 OS=Salmo salar OX=8030 GN=rbx1 PE=2 SV=2
P62877E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1
P62878E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyAF-4
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05110AF-4AF-4 proto-oncoprotein N-terminal regionFamilyInterproscan
PF18876AFF4_CHDAFF4, C-terminal homology domainDomainInterproscan
PF12678zf-rbx1RING-H2 zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR007797FamilyAF4/FMR2 familyInterproscan
IPR043640DomainAF4/FMR2, C-terminal homology domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR024766DomainZinc finger, RING-H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10528AF4/FMR2 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0032783Cellular Componentsuper elongation complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP