Detailed information of evm.model.Ap5.2370 in Astrangia poculata

Genomic Location: Ap5:24768737...24779407
NR annotation: KAJ7382428.1, hypothetical protein OS493_035077 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
O70244Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2
O60494Cubilin OS=Homo sapiens OX=9606 GN=CUBN PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00431CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000998DomainMAM domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR000859DomainCUB domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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