Detailed information of evm.model.Ap5.370 in Astrangia poculata

Genomic Location: Ap5:4061270...4064874
NR annotation: KAJ7371438.1, Hyaluronan and proteoglycan link protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ERB4Versican core protein (Fragments) OS=Rattus norvegicus OX=10116 GN=Vcan PE=2 SV=2
Q28062Brevican core protein OS=Bos taurus OX=9913 GN=BCAN PE=1 SV=1
Q61361Brevican core protein OS=Mus musculus OX=10090 GN=Bcan PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00193XlinkExtracellular link domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000538DomainLink domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR043210FamilyCD44 antigen-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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