Gene detail

Detailed information of evm.model.Ap5.611 in Astrangia poculata

Genomic Location: Ap5:6484038...6497302
NR annotation: XP_020604038.1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.Ap5.611

atggtcatgggaacgaccattttagatgatgctgccactctggcggagttggcacatcgggaataccaggcagggagctatgatcgtgccgaacaaatctgtatgcagttatggagacaacaacctgaaaacacgggagttcttcttctgttatcttcaatacactttcaatgccgtcgactagaccgatcggctcatttcagtacgttagccatcaagcaaaaccctgttctcgccgaggcgtactctaacttaggcaatgtcttcaaagagagaggtcagctgaaagatgcgctggacaactaccgccatgccgtgaagttaaaacccgatttcatcgatggctacatcaacctggctgccgcgttggtagctgctggcgatttagaaggagctgtgaatgcttatgcaacggcattgcagtataacccggatctatattgtgttaggagtgatcttggcaacttgttgaaagctcttggaagactagaagaggccaaggcgtgctacttgaaagcaatagaaacgcagcccagttttgcagtggcgtggagtaaccttgggtgcgtcttcaatgctcaaggagagatctggttggcgattcatcactttgagaaggctgtccagttggatcagaactttcttgatgcttatatcaaccttggaaatgttttaaaagaggccaggatttttgacagagctgttgctgcatacctacgagcattaaacttgagtcccaatcatgcagttgtccatggaaacttggcttgtgtctattacgaacaagggcttattgacttggcagtggatacatacagaagggcgattgaacttcaaccaaacttcccagatgcatattgcaacttggcaaatgctttgaaagaacaaggaaaggtaactgaagctgaggagtgctacaacactgccttgagactatgtcctacccacgcagattctctcaacaacctagcaaacatcaagagagagcaaggaaagatagaggagtctgtcaggctatattgtaaagctttagagatatttcctgaatttgctgctgcacattcaaaccttgcaagtgttctgcaacaacaggggaaacttcacgaagctctgctgcattacaaagaagccatccggattcatcctacatttgctgatgcttactcaaatatgggtaacacacttaaagaaatgcaagacattcaaggtgctattcagtgttacacaagagctatacagatcaacccagcatttgctgatgctcacagtaatctagcatcagttcacaaggactctggaaacattcctgaagcaatccagtcctacaggacagcactgaagttgaagccaagctttcctgatgcatactgtaaccttgcacattgtttacagattatctgtgactggacagattacgagtcccgcatgaagaaactagtgtccattgtcgcagaccagttggaaaacaacagacttccatctgtacaccctcatcacagcatgctgtacccactaacacacaaaatgagaagagacattgccaacagacatggaaatctttgtgttgaaaaggttgctcttttacacaagccaccatactcttatccaaactctttgaaggaaagtggtggaagacttagaataggctacgtttcaagtgattttggtaatcaccccacttcacatctgatgcagagcattccaggattccatgacagtaataaagttgagatattctgctatgctctcacggctgatgacagcaccagctttagaaagaagatcgagggagatgcagaacattttgttgatttgtcatcaatcccttgtcatggagaagctgctgatcgtattaatgctgatggtattcatgttcttgtcaacatgaatggttataccaaaggagccaggaatgaaatattcgcacttcgcccagctccagtccaggttatgtggctgggctaccctggaacaagtggtgcccaatacatggactacataatcacagatgaagtcacctcgcccctcgaactcgctgatcagtactctgagaagctcgcatacatgccatacacattcttcgttggtgatcacaagcagatgttccctcaccttatacaatacctgagagcgtccagcaaccaagtcatcgcagaagtgacgcaaaatggattggtaccagcgcatgctgcagctgtgctcctcgacgatgagaaaaatgatccaaacctggcacccaaagttggtgcgctgattgaagagaagaagaaggagtactctggatgcaaggatagcggcgagcggattccatcaactgtgccaataatcactcgctctcattacggccttccagaaaatgccaccgtgtactgcaactttaaccagctgtacaagatcgaccctccaacgttgcgcagctgggtgaacatcctcaagcatgtgcccaactctgtcctgtggctgctaagatttcctgccgtgggcgaacccaaccttaaggcacaggcaatggcaatggggctgtcccaggagcgtatcgtcttctctccggttgcgcctaaggaggagcatgttcgtcgcggccaactggctgatgtgtgtctggacacgccgctttgcaatggtcacacgacagggatggatgttctgtgggctggctgtcctatggtgacactcccgcttgaaacgttagcttcacgagtagcttcttcgcagctaacagctcttggatgtccagagcttgtggcaagaaatcgagaggattacgaaaacatcgccatcagactcggaaacgatggaaactacctgaaaagagtaaaagataaagtctggaatgcccgcctccgtagtccgctcttcaacacgaggcagtacgcgcacaaccttgaaggtcttctactgaaagtctggagaagacacgaaaatggactcgagccggatcatgttgcgtgctga

Transcript

evm.model.Ap5.611

TCAACTTTTATCGTCATGGTCATGGGAACGACCATTTTAGATGATGCTGCCACTCTGGCGGAGTTGGCACATCGGGAATACCAGGCAGGGAGCTATGATCGTGCCGAACAAATCTGTATGCAGTTATGGAGACAACAACCTGAAAACACGGGAGTTCTTCTTCTGTTATCTTCAATACACTTTCAATGCCGTCGACTAGACCGATCGGCTCATTTCAGTACGTTAGCCATCAAGCAAAACCCTGTTCTCGCCGAGGCGTACTCTAACTTAGGCAATGTCTTCAAAGAGAGAGGTCAGCTGAAAGATGCGCTGGACAACTACCGCCATGCCGTGAAGTTAAAACCCGATTTCATCGATGGCTACATCAACCTGGCTGCCGCGTTGGTAGCTGCTGGCGATTTAGAAGGAGCTGTGAATGCTTATGCAACGGCATTGCAGTATAACCCGGATCTATATTGTGTTAGGAGTGATCTTGGCAACTTGTTGAAAGCTCTTGGAAGACTAGAAGAGGCCAAGGCGTGCTACTTGAAAGCAATAGAAACGCAGCCCAGTTTTGCAGTGGCGTGGAGTAACCTTGGGTGCGTCTTCAATGCTCAAGGAGAGATCTGGTTGGCGATTCATCACTTTGAGAAGGCTGTCCAGTTGGATCAGAACTTTCTTGATGCTTATATCAACCTTGGAAATGTTTTAAAAGAGGCCAGGATTTTTGACAGAGCTGTTGCTGCATACCTACGAGCATTAAACTTGAGTCCCAATCATGCAGTTGTCCATGGAAACTTGGCTTGTGTCTATTACGAACAAGGGCTTATTGACTTGGCAGTGGATACATACAGAAGGGCGATTGAACTTCAACCAAACTTCCCAGATGCATATTGCAACTTGGCAAATGCTTTGAAAGAACAAGGAAAGGTAACTGAAGCTGAGGAGTGCTACAACACTGCCTTGAGACTATGTCCTACCCACGCAGATTCTCTCAACAACCTAGCAAACATCAAGAGAGAGCAAGGAAAGATAGAGGAGTCTGTCAGGCTATATTGTAAAGCTTTAGAGATATTTCCTGAATTTGCTGCTGCACATTCAAACCTTGCAAGTGTTCTGCAACAACAGGGGAAACTTCACGAAGCTCTGCTGCATTACAAAGAAGCCATCCGGATTCATCCTACATTTGCTGATGCTTACTCAAATATGGGTAACACACTTAAAGAAATGCAAGACATTCAAGGTGCTATTCAGTGTTACACAAGAGCTATACAGATCAACCCAGCATTTGCTGATGCTCACAGTAATCTAGCATCAGTTCACAAGGACTCTGGAAACATTCCTGAAGCAATCCAGTCCTACAGGACAGCACTGAAGTTGAAGCCAAGCTTTCCTGATGCATACTGTAACCTTGCACATTGTTTACAGATTATCTGTGACTGGACAGATTACGAGTCCCGCATGAAGAAACTAGTGTCCATTGTCGCAGACCAGTTGGAAAACAACAGACTTCCATCTGTACACCCTCATCACAGCATGCTGTACCCACTAACACACAAAATGAGAAGAGACATTGCCAACAGACATGGAAATCTTTGTGTTGAAAAGGTTGCTCTTTTACACAAGCCACCATACTCTTATCCAAACTCTTTGAAGGAAAGTGGTGGAAGACTTAGAATAGGCTACGTTTCAAGTGATTTTGGTAATCACCCCACTTCACATCTGATGCAGAGCATTCCAGGATTCCATGACAGTAATAAAGTTGAGATATTCTGCTATGCTCTCACGGCTGATGACAGCACCAGCTTTAGAAAGAAGATCGAGGGAGATGCAGAACATTTTGTTGATTTGTCATCAATCCCTTGTCATGGAGAAGCTGCTGATCGTATTAATGCTGATGGTATTCATGTTCTTGTCAACATGAATGGTTATACCAAAGGAGCCAGGAATGAAATATTCGCACTTCGCCCAGCTCCAGTCCAGGTTATGTGGCTGGGCTACCCTGGAACAAGTGGTGCCCAATACATGGACTACATAATCACAGATGAAGTCACCTCGCCCCTCGAACTCGCTGATCAGTACTCTGAGAAGCTCGCATACATGCCATACACATTCTTCGTTGGTGATCACAAGCAGATGTTCCCTCACCTTATACAATACCTGAGAGCGTCCAGCAACCAAGTCATCGCAGAAGTGACGCAAAATGGATTGGTACCAGCGCATGCTGCAGCTGTGCTCCTCGACGATGAGAAAAATGATCCAAACCTGGCACCCAAAGTTGGTGCGCTGATTGAAGAGAAGAAGAAGGAGTACTCTGGATGCAAGGATAGCGGCGAGCGGATTCCATCAACTGTGCCAATAATCACTCGCTCTCATTACGGCCTTCCAGAAAATGCCACCGTGTACTGCAACTTTAACCAGCTGTACAAGATCGACCCTCCAACGTTGCGCAGCTGGGTGAACATCCTCAAGCATGTGCCCAACTCTGTCCTGTGGCTGCTAAGATTTCCTGCCGTGGGCGAACCCAACCTTAAGGCACAGGCAATGGCAATGGGGCTGTCCCAGGAGCGTATCGTCTTCTCTCCGGTTGCGCCTAAGGAGGAGCATGTTCGTCGCGGCCAACTGGCTGATGTGTGTCTGGACACGCCGCTTTGCAATGGTCACACGACAGGGATGGATGTTCTGTGGGCTGGCTGTCCTATGGTGACACTCCCGCTTGAAACGTTAGCTTCACGAGTAGCTTCTTCGCAGCTAACAGCTCTTGGATGTCCAGAGCTTGTGGCAAGAAATCGAGAGGATTACGAAAACATCGCCATCAGACTCGGAAACGATGGAAACTACCTGAAAAGAGTAAAAGATAAAGTCTGGAATGCCCGCCTCCGTAGTCCGCTCTTCAACACGAGGCAGTACGCGCACAACCTTGAAGGTCTTCTACTGAAAGTCTGGAGAAGACACGAAAATGGACTCGAGCCGGATCATGTTGCGTGCTGA

Protein

Uniprot

Uniprot term	Description
O15294	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens OX=9606 GN=OGT PE=1 SV=3
P81436	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Oryctolagus cuniculus OX=9986 GN=OGT PE=1 SV=2
Q27HV0	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Sus scrofa OX=9823 GN=OGT PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13844	Glyco_transf_41	Glycosyl transferase family 41	Family	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF13414	TPR_11	TPR repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR029489	Domain	O-GlcNAc transferase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44366	UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006493	Biological Process	protein O-linked glycosylation	Interproscan
GO:0097363	Molecular Function	protein O-acetylglucosaminyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09667	OGT; protein O-GlcNAc transferase	EC:2.4.1.255	Chromosome and associated proteins	ko03036	deepkoala