Detailed information of evm.model.Ap5.879 in Astrangia poculata

Genomic Location: Ap5:9231371...9248361
NR annotation: XP_027060642.1, polycystic kidney disease 2-like 1 protein [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
Q4GZT3Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1
Q13563Polycystin-2 OS=Homo sapiens OX=9606 GN=PKD2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051223FamilyPolycystinInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR002048DomainEF-hand domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04986PKD2; polycystin 2-Ion channelsko04040deepkoala

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