Detailed information of evm.model.Ap6.1280 in Astrangia poculata

Genomic Location: Ap6:12573528...12587389
NR annotation: XP_020621854.1, chromodomain-helicase-DNA-binding protein 5-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12873Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens OX=9606 GN=CHD3 PE=1 SV=3
Q14839Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2
D3ZD32Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06465DUF1087CHD subfamily II, DUF1087DomainInterproscan
PF08074CHDCT2CHDCT2 (NUC038) domainDomainInterproscan
PF06461CHDII_SANT-likeCHD subfamily II, SANT-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR009463DomainDomain of unknown function DUF1087Interproscan
IPR012957DomainCHD, C-terminal 2Interproscan
IPR009462DomainCHD subfamily II, SANT-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

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