Gene detail

Detailed information of evm.model.Ap6.2540 in Astrangia poculata

Genomic Location: Ap6:25407345...25417581
NR annotation: XP_020605596.1, LOW QUALITY PROTEIN: androglobin-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.Ap6.2540

atggcacctagtgtagttggatcactgaatgaaaaagatgagaaaagtaagaaggctaagcaaccaatagtgatttggcctgaatggactgaacaggacattgcccaggaaaaatgggacacagcacacaaagcaaaagaaaaagaaaagggaaaaagcccaaatccacacccttatgaagatcctgaaggaaggacagatttaccagcttccataaaatgcaatgtggatcactggaagaggcctgtcgagtttatactagaaaagtcaccagttgttgtagacccaaagagcctgacagagggaatagacttgctgtctgtaaatgatcatttgacaaacagtgagttacttcgttggatcattggtcaggtgacatgcctatggaagcaacatttcaaggtggaaccagtagagactgtcaaaggcacaaaagacatgaaggagagcaacaaaggagacaaagagaaggacaaggaaaaggataaagaccgagagaaggacaaggacgcattgttagaagacaacacttggaaaccttggggtcacatctggccaaaagagaagacaaaaggaagtcctctgcctgtctacaaccctggtggaaaatactgtgttaggttattctggatgggtacttggcggaaagtgacagttgatgactggatgccatttgatgaggacggcaaacttctcttaccagccacgcctaatgaacatgaactttggcctatgttactctctaaagcacttataaaagttgcttcattagattatgctggtggttataatgcaagtgagattggtgactttacagtggttcatgctttgacgggatggttgccggaaattatccctctaaggtgcggcaatactgttgaaatctggaaacttcttctccaagccttgccacgttggaaattagagaacacaccgccaccagaagagaagaaacagccaaatatggagggaaagaataaaaaagatgacaaggacaaggagagaaaatctaccaagtctgacaaaggacaagagaaagctgacagagacaacaagaacaaagataaagataaagacaaaggcacaccagctgctaatcccgtggaagtccccaaggagccggaatttgttatctttgccagctactgccatcctccaaatacaccaatgagacattctgttcttaaagaaatggctgatgcatctgaaaaactgaggcagtctggtctgtcccataaccacccccacactgtcatgttaacaacagcaagggactgccccctggttcctcccccgccccctgtgcagatccctcggtggaagcttattcggcagaagaagaagaagcagccggtagagcctgcactgactcctcctgagccaccaaaggagccccagttcttggaaattgtgtctccttttcttaaccacaaagtcagccccatccctgtcagcagagcaagaacccctgtcaggtggctgaaattccgtcctgagaagccaatgggtgaaatactggaagaaggtgacaaaggtgatgaagaaaagaaggagggtggggagggagaggaaggaacagaaaagccagctactgagaagaaagaagggggtactgaagaaactgcagccattaaagaggatgacaaacccaagaccccaactccaaggctggaaggtgaagagaccaaaccagaccatgacaaagaaagagaacaacttaaggaaagcaaagatagtcgtgaaagccttaaggaacgaccaactaccaaggattctctgaaggcaaaagagagagaaaagtcagcaaaaagtgagagaggagaaaaagataagttacccaaatctgccgacaataagagtagatcaggaagcaagctgagtgtgattgataaacctgaacgaaacaagtctggtgggctgtcaccaaaagggagaagaatgtctaggatggaaaaacctggagacttggccctaaaaactcctccagagtcaagacgaatgtcaagggtagacaaaggagtgaaagttgaaatagaaagagaatcattgcacaaagttgacattattcgtgaagatgaatgccctgtgcttgatcttcccacttgtgctgttaatgagggagacaagactccgggtgaggctacagatggagaaacgacagaagagaagactgaaggagataagactgaagaaggcgacaaggctaaagaagatagcaacaaagagaagaaaatctggatggagtatgctgacttctgcaaatgctttagacatttgtatatattccacaaacctaacacatacaattattccaagggaaactctgagttaaagtcctcccctgtccttgatatcctcagctttcaaaagatccaagagatcagactgtggcagtga

Transcript

evm.model.Ap6.2540

TTGCTTCATCCTGGCAACACTAGAACACGAAGGCAATCAATGGCACCTAGTGTAGTTGGATCACTGAATGAAAAAGATGAGAAAAGTAAGAAGGCTAAGCAACCAATAGTGATTTGGCCTGAATGGACTGAACAGGACATTGCCCAGGAAAAATGGGACACAGCACACAAAGCAAAAGAAAAAGAAAAGGGAAAAAGCCCAAATCCACACCCTTATGAAGATCCTGAAGGAAGGACAGATTTACCAGCTTCCATAAAATGCAATGTGGATCACTGGAAGAGGCCTGTCGAGTTTATACTAGAAAAGTCACCAGTTGTTGTAGACCCAAAGAGCCTGACAGAGGGAATAGACTTGCTGTCTGTAAATGATCATTTGACAAACAGTGAGTTACTTCGTTGGATCATTGGTCAGGTGACATGCCTATGGAAGCAACATTTCAAGGTGGAACCAGTAGAGACTGTCAAAGGCACAAAAGACATGAAGGAGAGCAACAAAGGAGACAAAGAGAAGGACAAGGAAAAGGATAAAGACCGAGAGAAGGACAAGGACGCATTGTTAGAAGACAACACTTGGAAACCTTGGGGTCACATCTGGCCAAAAGAGAAGACAAAAGGAAGTCCTCTGCCTGTCTACAACCCTGGTGGAAAATACTGTGTTAGGTTATTCTGGATGGGTACTTGGCGGAAAGTGACAGTTGATGACTGGATGCCATTTGATGAGGACGGCAAACTTCTCTTACCAGCCACGCCTAATGAACATGAACTTTGGCCTATGTTACTCTCTAAAGCACTTATAAAAGTTGCTTCATTAGATTATGCTGGTGGTTATAATGCAAGTGAGATTGGTGACTTTACAGTGGTTCATGCTTTGACGGGATGGTTGCCGGAAATTATCCCTCTAAGGTGCGGCAATACTGTTGAAATCTGGAAACTTCTTCTCCAAGCCTTGCCACGTTGGAAATTAGAGAACACACCGCCACCAGAAGAGAAGAAACAGCCAAATATGGAGGGAAAGAATAAAAAAGATGACAAGGACAAGGAGAGAAAATCTACCAAGTCTGACAAAGGACAAGAGAAAGCTGACAGAGACAACAAGAACAAAGATAAAGATAAAGACAAAGGCACACCAGCTGCTAATCCCGTGGAAGTCCCCAAGGAGCCGGAATTTGTTATCTTTGCCAGCTACTGCCATCCTCCAAATACACCAATGAGACATTCTGTTCTTAAAGAAATGGCTGATGCATCTGAAAAACTGAGGCAGTCTGGTCTGTCCCATAACCACCCCCACACTGTCATGTTAACAACAGCAAGGGACTGCCCCCTGGTTCCTCCCCCGCCCCCTGTGCAGATCCCTCGGTGGAAGCTTATTCGGCAGAAGAAGAAGAAGCAGCCGGTAGAGCCTGCACTGACTCCTCCTGAGCCACCAAAGGAGCCCCAGTTCTTGGAAATTGTGTCTCCTTTTCTTAACCACAAAGTCAGCCCCATCCCTGTCAGCAGAGCAAGAACCCCTGTCAGGTGGCTGAAATTCCGTCCTGAGAAGCCAATGGGTGAAATACTGGAAGAAGGTGACAAAGGTGATGAAGAAAAGAAGGAGGGTGGGGAGGGAGAGGAAGGAACAGAAAAGCCAGCTACTGAGAAGAAAGAAGGGGGTACTGAAGAAACTGCAGCCATTAAAGAGGATGACAAACCCAAGACCCCAACTCCAAGGCTGGAAGGTGAAGAGACCAAACCAGACCATGACAAAGAAAGAGAACAACTTAAGGAAAGCAAAGATAGTCGTGAAAGCCTTAAGGAACGACCAACTACCAAGGATTCTCTGAAGGCAAAAGAGAGAGAAAAGTCAGCAAAAAGTGAGAGAGGAGAAAAAGATAAGTTACCCAAATCTGCCGACAATAAGAGTAGATCAGGAAGCAAGCTGAGTGTGATTGATAAACCTGAACGAAACAAGTCTGGTGGGCTGTCACCAAAAGGGAGAAGAATGTCTAGGATGGAAAAACCTGGAGACTTGGCCCTAAAAACTCCTCCAGAGTCAAGACGAATGTCAAGGGTAGACAAAGGAGTGAAAGTTGAAATAGAAAGAGAATCATTGCACAAAGTTGACATTATTCGTGAAGATGAATGCCCTGTGCTTGATCTTCCCACTTGTGCTGTTAATGAGGGAGACAAGACTCCGGGTGAGGCTACAGATGGAGAAACGACAGAAGAGAAGACTGAAGGAGATAAGACTGAAGAAGGCGACAAGGCTAAAGAAGATAGCAACAAAGAGAAGAAAATCTGGATGGAGTATGCTGACTTCTGCAAATGCTTTAGACATTTGTATATATTCCACAAACCTAACACATACAATTATTCCAAGGGAAACTCTGAGTTAAAGTCCTCCCCTGTCCTTGATATCCTCAGCTTTCAAAAGATCCAAGAGATCAGACTGTGGCAGTGA

Protein

Uniprot

Uniprot term	Description
Q8N7X0	Androglobin OS=Homo sapiens OX=9606 GN=ADGB PE=1 SV=3
G3UZ78	Androglobin OS=Mus musculus OX=10090 GN=Adgb PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00648	Peptidase_C2	Calpain family cysteine protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053033	Family	Androglobin-like	Interproscan
IPR001300	Domain	Peptidase C2, calpain, catalytic domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46298	ANDROGLOBIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004198	Molecular Function	calcium-dependent cysteine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan