Gene detail

Detailed information of evm.model.Ap6.2912.1.5f15e1e1 in Astrangia poculata

Genomic Location: Ap6:29657393...29668707
NR annotation: XP_020604543.1, tyrosine--tRNA ligase, cytoplasmic-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6TGS6	Tyrosine--tRNA ligase, cytoplasmic OS=Danio rerio OX=7955 GN=yars1 PE=2 SV=2
Q5ZJ08	Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 GN=YARS1 PE=2 SV=1
Q4KM49	Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan
PF01588	tRNA_bind	Putative tRNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002307	Family	Tyrosine-tRNA ligase	Interproscan
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR002547	Domain	tRNA-binding domain	Interproscan
IPR050489	Family	Tyrosine--tRNA ligase	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46264	TYROSINE-TRNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004831	Molecular Function	tyrosine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006437	Biological Process	tyrosyl-tRNA aminoacylation	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01866	YARS, tyrS; tyrosyl-tRNA synthetase	EC:6.1.1.1	Mitochondrial biogenesis	ko03029	deepkoala