Detailed information of evm.model.Ap6.3028 in Astrangia poculata

Genomic Location: Ap6:30906216...30932549
NR annotation: XP_022782737.1, uncharacterized protein LOC111323609 isoform X1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00267Transcription elongation factor SPT5 OS=Homo sapiens OX=9606 GN=SUPT5H PE=1 SV=1
Q5R405Transcription elongation factor SPT5 OS=Pongo abelii OX=9601 GN=SUPT5H PE=2 SV=1
O55201Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21240Nup98_GLEBSNup98, Gle2-binding sequenceDomainInterproscan
PF02493MORNMORN repeatRepeatInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003409RepeatMORN repeatInterproscan
IPR000684RepeatRNA polymerase II, heptapeptide repeat, eukaryoticInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR041980DomainSpt5, KOW domain repeat 6Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23084PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan

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