Detailed information of evm.model.Ap6.829 in Astrangia poculata

Genomic Location: Ap6:8042094...8045038
NR annotation: KAJ7394748.1, peptidase M10A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P3343472 kDa type IV collagenase OS=Mus musculus OX=10090 GN=Mmp2 PE=1 SV=1
P3343672 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2
Q9061172 kDa type IV collagenase OS=Gallus gallus OX=9031 GN=MMP2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021158Binding_sitePeptidase M10A, cysteine switch, zinc binding siteInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

TOP