Detailed information of evm.model.Ap6.830 in Astrangia poculata

Genomic Location: Ap6:8048638...8056978
NR annotation: CAH3107719.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P23097Collagenase 3 (Fragment) OS=Rattus norvegicus OX=10116 GN=Mmp13 PE=1 SV=1
P33435Collagenase 3 OS=Mus musculus OX=10090 GN=Mmp13 PE=1 SV=1
P45452Collagenase 3 OS=Homo sapiens OX=9606 GN=MMP13 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR021158Binding_sitePeptidase M10A, cysteine switch, zinc binding siteInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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