Detailed information of evm.model.Ap7.1175 in Astrangia poculata

Genomic Location: Ap7:12986764...12995328
NR annotation: XP_027044967.1, thrombospondin-1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2
Q8CG65SCO-spondin OS=Mus musculus OX=10090 GN=Sspo PE=2 SV=2
Q2PC93SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002557DomainChitin binding domainInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan

TOP