Detailed information of evm.model.Ap7.1633 in Astrangia poculata

Genomic Location: Ap7:17712846...17725977
NR annotation: CAH3123728.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P52176Matrix metalloproteinase-9 OS=Bos taurus OX=9913 GN=MMP9 PE=2 SV=1
P13508Protein glp-1 OS=Caenorhabditis elegans OX=6239 GN=glp-1 PE=1 SV=1
P14780Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR051355FamilyNotch and Slit guidance proteinInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836SLIT HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP