Detailed information of evm.model.Ap7.2383 in Astrangia poculata

Genomic Location: Ap7:25244124...25246067
NR annotation: HAS45470.1, hypothetical protein [Microscillaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CV25Secreted RxLR effector protein 78 OS=Plasmopara viticola OX=143451 GN=RXLR78 PE=3 SV=1
P16423Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13966zf-RVTzinc-binding in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052343FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR026960DomainReverse transcriptase zinc-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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