Detailed information of evm.model.Ap8.1696 in Astrangia poculata

Genomic Location: Ap8:18479741...18496319
NR annotation: KAJ7381393.1, hypothetical protein OS493_001527 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6P2Y2Dynein assembly factor with WD repeat domains 1 OS=Xenopus tropicalis OX=8364 GN=daw1 PE=2 SV=1
Q5FWQ6Dynein assembly factor with WD repeat domains 1 OS=Xenopus laevis OX=8355 GN=daw1 PE=2 SV=1
D3Z7A5Dynein assembly factor with WD repeat domains 1 OS=Mus musculus OX=10090 GN=Daw1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19846WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0017070Molecular FunctionU6 snRNA bindingInterproscan
GO:0030621Molecular FunctionU4 snRNA bindingInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19760DAW1; dynein assembly factor with WDR repeat domains 1-Cytoskeleton proteinsko04812deepkoala

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