Detailed information of evm.model.Ap8.257 in Astrangia poculata

Genomic Location: Ap8:2593186...2599252
NR annotation: XP_020628298.1, lysosome-associated membrane glycoprotein 3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P05300Lysosome-associated membrane glycoprotein 1 OS=Gallus gallus OX=9031 GN=LAMP1 PE=2 SV=1
P11279Lysosome-associated membrane glycoprotein 1 OS=Homo sapiens OX=9606 GN=LAMP1 PE=1 SV=3
P11438Lysosome-associated membrane glycoprotein 1 OS=Mus musculus OX=10090 GN=Lamp1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01299LampLysosome-associated membrane glycoprotein (Lamp)FamilyInterproscan
PF21222Lamp2_2ndLysosome-associated membrane glycoprotein 2, transmembrane segmentDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048528DomainLysosome-associated membrane glycoprotein 2-like, luminal domainsInterproscan
IPR002000FamilyLysosome-associated membrane glycoproteinInterproscan
IPR048524DomainLysosome-associated membrane glycoprotein 2-like, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11506LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0031902Cellular Componentlate endosome membraneInterproscan
GO:0072594Biological Processestablishment of protein localization to organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06528LAMP1_2, CD107; lysosomal-associated membrane protein 1/2-CD moleculesko04090deepkoala

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