Gene detail

Detailed information of evm.model.Ap8.272 in Astrangia poculata

Genomic Location: Ap8:2698443...2718577
NR annotation: XP_027053765.1, autophagy-related protein 16-1-like [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q5I0B9	Autophagy-related protein 16 OS=Xenopus tropicalis OX=8364 GN=atg16 PE=2 SV=2
Q676U5	Autophagy-related protein 16-1 OS=Homo sapiens OX=9606 GN=ATG16L1 PE=1 SV=2
Q8C0J2	Autophagy-related protein 16-1 OS=Mus musculus OX=10090 GN=Atg16l1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF08614	ATG16	Autophagy protein 16 (ATG16)	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR045160	Family	Autophagy-related protein 16	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR013923	Domain	Autophagy-related protein 16 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19878	AUTOPHAGY PROTEIN 16-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000045	Biological Process	autophagosome assembly	Interproscan
GO:0000421	Cellular Component	autophagosome membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17890	ATG16L1; autophagy-related protein 16-1	-	Mitochondrial biogenesis	ko03029	deepkoala