Gene detail

Detailed information of evm.model.Ap8.502 in Astrangia poculata

Genomic Location: Ap8:5536391...5561830
NR annotation: XP_020611937.1, uncharacterized protein LOC110050360 isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.Ap8.502

atgcagcatcctcaaaaaggaagaaggccttcagtatatctggattgtttttcagagggttggtccataccgcggcataatctacatcttggacgctccatcgcaaaaggaaagtttggagatgtcattcaagctgaatacaatggccagaaggtgtgcgtcaagacaccaccagatgacaaacctggttattcagtactaaaagaagctgccataatgacgcatttgaaccataaaaaccttgtgaaattaattggggtgtcattggatggaagtcctctttacattgtgacagaattttgtggaaagggagatttaaggaactacataaagacaagaggccgcgccgtaattggacagaaagatctggtacgatttgctcgggatgtagctgacggcatgcgttatttagagtcgaaacaaatggtgcacaggcagttaatgacaagttatgtgcttgtacatgaaggtggaacagcaaaagtctcgggatttggacgtgcacgagaagctactaaattgtattttgaagtagaagaattataccctataaagtggactgctcctgaagtactgaaaggccagacattttctacacagtccgatgtgtggagttacggtgtagccttatgggaactattctcatttggaagaacaccataccccggtatgactaacaataaagctgtggaggagatatatcatggatatcgcatggaatgcccggatgggtgtcctaaacaagtttatgatttaatgaggaactgttggaacatcgacccaaaacagaggccaagatttaattcaatttggagaattatgcatggatttctattcgacctacttgatgatctaccgccgtttacttctgcagaagtgcctccagaaattctagcacgaggacctttggctttggaagcttacaacaaggccattactgaagggaaaacgtgtgtcaagagggtgccagccatgttaattggacaggaccactcaggaaagaccagcttaaagaagtcactcatgggaaaacctttcaacccagatgaagatagcactgtaggaatagatgctgatccttcttatttccatgtatcaactgaagcttggaaagcgggaaagaaggaccaagaaaacgattctgagatatctgtttcttttgaacaacatgcagcgcgactgactgtggaaaagttgaggctggaaaagagcactcccagtgacagtgtttcagagcctagacacaccgaaacgattctccaggataacatatttttggcaagcgtaaccagtgatgtcactgcaatgtcttcaaattcagatgtgactatctcgcatagtcatgtgtcggctgaagaagacagtaatgaggttcttttagaatcttcagctccagatgtctctgagctcccggcgacatttaaagatccagagataggtggcaagatacccgaaatgccagaagatatcgcagctttgattgaaatgaggctgaaagaagttgatacagtggaagacgaagaaagcatcatttcagttttgtgggattttggtggacaatcagtttactatacaacacacccactttttcttacttcaagagctatctttcttctagttaatgacctcagccggaatccacacgaaagggccaaattagttatgaagcaaggaatgtttacgaaaatcgaggacaactttgatttgagaaccaatctggattaccttgatttttggatgacttcggttgcttccataggccgtagtgaaagtaatgaagaaagtcctatttccgaagtattgccagagaagcttcccccagttttcttagtgtgtactcatgctgatacaccttatggtggtggtgatcctagagcacaagccaatgaagtatttggttttctacagactaagtcctacaaaacgcatttatatgacgaagtctttgtcgtggataacactaagtctgggcatgaatctgagtgttcaggtgttgtgcgtttacgcaacgaagtacttgccgttgctaaagagctaccacaaatgaaagaagccattcctatcaagtggttaaaatatgagaagtcacttcaggttatgaaagaggatggtcacaaatggatctctcttgacagtgcaaaacaaattgcgtctgaagtatgcaacgttgttgacgatagacaatttcatacacttttgaattttttgcatgaccagagaattttgatacactttgatgagactccggagctaaacaaattggtggtcttggaccctcagtggttgattgacgtgttcaaggaggtaattaccattagaccctatcacgggaaggagaagcaatttagagaactatggcataggcttgagaaagaagggatcctggaggaagaacttttagaacatgtttggggtcctttatttgacagcaaagaaacctctgtgagtcttattgcaatcatggagaaattcagcttgctttgtcctctgccttcatctcatgcttcttgtagtaagcagtacctagttccatccatgttgatgtctcatccaccagagggtatcatagagctggtaaagtctgcgcaaataccttcactttttctcaaatttgaatcagggcatgttccgcttggcttcttcccccgactggcgctgcagttctttcagtgggttaaagaagaatgtttgtgcccttcggaccctcagctgtaccacaattttgccagattttacacttctgaagaggaaacctgctctgtagtcctcctgtgtaattcattttccattgaagttgttgttcatcgaggaaatgccagtcctgatttggcagacagttttcaatcaaaaatgactttgtctgctgatgccagccaaggcacctctgatgtgaaatgtgctcgtgcagtgcgtaggcagctgggattgatgcttgagtccatgcgtaacgagttctgctggctgaagaacatgagatacgaagtaagcttcatctgcccagtctgttgtcaaggaggttcagttacctattgtcgcacacattgtgcacaaggttgcaagcaagtggaatgcttgcacttctggtccgagtcacagctatgcgacaccaagagtatctcttgcacgaagtctgctgttgcactgaacaagagagttgatatcgagcagtttgaaccatggtttctacctcgaagcaatcagcctacaaccgatgagcatgatgggggaaatttgactgtggaagcgagtaaagaggttgcccttcctggtgaagttcaagaatctcttttgtcacagtcgtgtgatgccaaagaggttgttcttcaggtgggaaagacgatgcagttggaccagtcctctctggaacagctagagcccgagaccaagaaattgatccgttgctttgcgaggaaagctatagatgcaaacaggcttgacgtgttcgaacatttgagagagattacaccagctggaactactggtcctttgctgcctgaaaaccttgatgtccgcggtatccctcattctaagggaagggaacttacaatcgacttgtgtggcggcgatgattggaagacagttgccgaggctctgggcttgagtccacaagaaattcgtttccttgacaaacgtactttgaacccacttgatgctgctttggcatttattgctaaacagcgccacataaccgttggtgagctgtacgacttgttaaacgaacgtgggtttcctatgctcgctgatcttttgtag

Transcript

evm.model.Ap8.502

ATGCAGCATCCTCAAAAAGGAAGAAGGCCTTCAGTATATCTGGATTGTTTTTCAGAGGGTTGGTCCATACCGCGGCATAATCTACATCTTGGACGCTCCATCGCAAAAGGAAAGTTTGGAGATGTCATTCAAGCTGAATACAATGGCCAGAAGGTGTGCGTCAAGACACCACCAGATGACAAACCTGGTTATTCAGTACTAAAAGAAGCTGCCATAATGACGCATTTGAACCATAAAAACCTTGTGAAATTAATTGGGGTGTCATTGGATGGAAGTCCTCTTTACATTGTGACAGAATTTTGTGGAAAGGGAGATTTAAGGAACTACATAAAGACAAGAGGCCGCGCCGTAATTGGACAGAAAGATCTGGTACGATTTGCTCGGGATGTAGCTGACGGCATGCGTTATTTAGAGTCGAAACAAATGGTGCACAGGCAGTTAATGACAAGTTATGTGCTTGTACATGAAGGTGGAACAGCAAAAGTCTCGGGATTTGGACGTGCACGAGAAGCTACTAAATTGTATTTTGAAGTAGAAGAATTATACCCTATAAAGTGGACTGCTCCTGAAGTACTGAAAGGCCAGACATTTTCTACACAGTCCGATGTGTGGAGTTACGGTGTAGCCTTATGGGAACTATTCTCATTTGGAAGAACACCATACCCCGGTATGACTAACAATAAAGCTGTGGAGGAGATATATCATGGATATCGCATGGAATGCCCGGATGGGTGTCCTAAACAAGTTTATGATTTAATGAGGAACTGTTGGAACATCGACCCAAAACAGAGGCCAAGATTTAATTCAATTTGGAGAATTATGCATGGATTTCTATTCGACCTACTTGATGATCTACCGCCGTTTACTTCTGCAGAAGTGCCTCCAGAAATTCTAGCACGAGGACCTTTGGCTTTGGAAGCTTACAACAAGGCCATTACTGAAGGGAAAACGTGTGTCAAGAGGGTGCCAGCCATGTTAATTGGACAGGACCACTCAGGAAAGACCAGCTTAAAGAAGTCACTCATGGGAAAACCTTTCAACCCAGATGAAGATAGCACTGTAGGAATAGATGCTGATCCTTCTTATTTCCATGTATCAACTGAAGCTTGGAAAGCGGGAAAGAAGGACCAAGAAAACGATTCTGAGATATCTGTTTCTTTTGAACAACATGCAGCGCGACTGACTGTGGAAAAGTTGAGGCTGGAAAAGAGCACTCCCAGTGACAGTGTTTCAGAGCCTAGACACACCGAAACGATTCTCCAGGATAACATATTTTTGGCAAGCGTAACCAGTGATGTCACTGCAATGTCTTCAAATTCAGATGTGACTATCTCGCATAGTCATGTGTCGGCTGAAGAAGACAGTAATGAGGTTCTTTTAGAATCTTCAGCTCCAGATGTCTCTGAGCTCCCGGCGACATTTAAAGATCCAGAGATAGGTGGCAAGATACCCGAAATGCCAGAAGATATCGCAGCTTTGATTGAAATGAGGCTGAAAGAAGTTGATACAGTGGAAGACGAAGAAAGCATCATTTCAGTTTTGTGGGATTTTGGTGGACAATCAGTTTACTATACAACACACCCACTTTTTCTTACTTCAAGAGCTATCTTTCTTCTAGTTAATGACCTCAGCCGGAATCCACACGAAAGGGCCAAATTAGTTATGAAGCAAGGAATGTTTACGAAAATCGAGGACAACTTTGATTTGAGAACCAATCTGGATTACCTTGATTTTTGGATGACTTCGGTTGCTTCCATAGGCCGTAGTGAAAGTAATGAAGAAAGTCCTATTTCCGAAGTATTGCCAGAGAAGCTTCCCCCAGTTTTCTTAGTGTGTACTCATGCTGATACACCTTATGGTGGTGGTGATCCTAGAGCACAAGCCAATGAAGTATTTGGTTTTCTACAGACTAAGTCCTACAAAACGCATTTATATGACGAAGTCTTTGTCGTGGATAACACTAAGTCTGGGCATGAATCTGAGTGTTCAGGTGTTGTGCGTTTACGCAACGAAGTACTTGCCGTTGCTAAAGAGCTACCACAAATGAAAGAAGCCATTCCTATCAAGTGGTTAAAATATGAGAAGTCACTTCAGGTTATGAAAGAGGATGGTCACAAATGGATCTCTCTTGACAGTGCAAAACAAATTGCGTCTGAAGTATGCAACGTTGTTGACGATAGACAATTTCATACACTTTTGAATTTTTTGCATGACCAGAGAATTTTGATACACTTTGATGAGACTCCGGAGCTAAACAAATTGGTGGTCTTGGACCCTCAGTGGTTGATTGACGTGTTCAAGGAGGTAATTACCATTAGACCCTATCACGGGAAGGAGAAGCAATTTAGAGAACTATGGCATAGGCTTGAGAAAGAAGGGATCCTGGAGGAAGAACTTTTAGAACATGTTTGGGGTCCTTTATTTGACAGCAAAGAAACCTCTGTGAGTCTTATTGCAATCATGGAGAAATTCAGCTTGCTTTGTCCTCTGCCTTCATCTCATGCTTCTTGTAGTAAGCAGTACCTAGTTCCATCCATGTTGATGTCTCATCCACCAGAGGGTATCATAGAGCTGGTAAAGTCTGCGCAAATACCTTCACTTTTTCTCAAATTTGAATCAGGGCATGTTCCGCTTGGCTTCTTCCCCCGACTGGCGCTGCAGTTCTTTCAGTGGGTTAAAGAAGAATGTTTGTGCCCTTCGGACCCTCAGCTGTACCACAATTTTGCCAGATTTTACACTTCTGAAGAGGAAACCTGCTCTGTAGTCCTCCTGTGTAATTCATTTTCCATTGAAGTTGTTGTTCATCGAGGAAATGCCAGTCCTGATTTGGCAGACAGTTTTCAATCAAAAATGACTTTGTCTGCTGATGCCAGCCAAGGCACCTCTGATGTGAAATGTGCTCGTGCAGTGCGTAGGCAGCTGGGATTGATGCTTGAGTCCATGCGTAACGAGTTCTGCTGGCTGAAGAACATGAGATACGAAGTAAGCTTCATCTGCCCAGTCTGTTGTCAAGGAGGTTCAGTTACCTATTGTCGCACACATTGTGCACAAGGTTGCAAGCAAGTGGAATGCTTGCACTTCTGGTCCGAGTCACAGCTATGCGACACCAAGAGTATCTCTTGCACGAAGTCTGCTGTTGCACTGAACAAGAGAGTTGATATCGAGCAGTTTGAACCATGGTTTCTACCTCGAAGCAATCAGCCTACAACCGATGAGCATGATGGGGGAAATTTGACTGTGGAAGCGAGTAAAGAGGTTGCCCTTCCTGGTGAAGTTCAAGAATCTCTTTTGTCACAGTCGTGTGATGCCAAAGAGGTTGTTCTTCAGGTGGGAAAGACGATGCAGTTGGACCAGTCCTCTCTGGAACAGCTAGAGCCCGAGACCAAGAAATTGATCCGTTGCTTTGCGAGGAAAGCTATAGATGCAAACAGGCTTGACGTGTTCGAACATTTGAGAGAGATTACACCAGCTGGAACTACTGGTCCTTTGCTGCCTGAAAACCTTGATGTCCGCGGTATCCCTCATTCTAAGGGAAGGGAACTTACAATCGACTTGTGTGGCGGCGATGATTGGAAGACAGTTGCCGAGGCTCTGGGCTTGAGTCCACAAGAAATTCGTTTCCTTGACAAACGTACTTTGAACCCACTTGATGCTGCTTTGGCATTTATTGCTAAACAGCGCCACATAACCGTTGGTGAGCTGTACGACTTGTTAAACGAACGTGGGTTTCCTATGCTCGCTGATCTTTTGTAG

Protein

Uniprot

Uniprot term	Description
Q0VBZ0	Tyrosine-protein kinase CSK OS=Bos taurus OX=9913 GN=CSK PE=2 SV=1
P32577	Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1
P41243	Megakaryocyte-associated tyrosine-protein kinase OS=Rattus norvegicus OX=10116 GN=Matk PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR050198	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000488	Domain	Death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004715	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan