Gene detail

Detailed information of evm.model.Ap9.209 in Astrangia poculata

Genomic Location: Ap9:2073423...2081189
NR annotation: XP_027041223.1, vitamin K-dependent gamma-carboxylase-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.Ap9.209

atgggcaaaaaaggcacaatgaaggaagacaagacaagtcagtcatccatggctcagtccagcttatggaataaattcttacttttcatgacatcaccagttgatccatcaaaccttggtgtattaagaattttatttggattgctaatgattattgatattcctcaagaacgtggcatgctatacattgaaagacattttggtgaagaaacttgccacttcccacttttcaactttgttcaacctctgtcagtcgactggatgcatgtcgtgtaccttgtcatgtttcttggggcccttgggatctttcttggatttaagtttcgttttagctgtttgatgttcatggtgacatattggtacgtttttatgttggagaaggcacgatggaacaatcattcatacttgtatggattgttttcagtgatgcttcttatgactgatgctaaccgctactggtctttggatggaatatttaatcctgaattaaagaattctcatgtaccaaagtggaactatgttttgctacgttttcagatttttctggtatacttttatgctggaataaagaagattgacatggattggatgacaggatattccatgacaggactgtcccgtgcatgggtgtttgatccgttccgattttttctaagcaatgaacaaattgacctctttcttgtacacattgcagggttaatgtttgacctgtcagagggttttcttctcgtttttgaaaagacacgccccattggaatattatttggtgccatgttccatggcatgaattcccagatgtttcacattggcatgttcccgtacgccatgctggccacgttacctttattttgcgcatacaactggcctaagaaagtgttttcatgcttgccgagcttcagctccaagattttgccatcacaagctgaaccacaagctagtgaacattgtgtgtacccagaagctgtcaaggttccagagagtgataagaacaagagtggtaaaacaaaaacgtcaaagaaatgtcgaacaccaacagccaagcagacggctgtagtgtgcgtcatgcttctttacattggtgttcagctgtttcttccatactcacactttattactaagggttataatgcgtggacccaaggtctgtatggctactcatgggacatgatggtacattcctggagtactcaacacgttagggtcaaagtcgtggatcgagcgtctggagaggtcacttatataaggccctcggcgtggttaagagagaagcggcagtcacgttggaattcacacccagacatgaccaaacagtacatgacctgcatggctgagaagctcaaggctcgcacagacctcaacataactgatcctgctatctacctggatgtgtggcgctccatgaacaagcgctttcaacagcgcatggttgatcccagagtggacatggtcactgcgccatggtcgccatttaaacagacaccttgggttcagcccttgctgacggagctgtctccgtggcgcgagaaaatggtccagattagggaggagctgaaggagaagtccaattttagtgccattacatttgtggctgattttccgggtcttttcttggaaaattatgtggttgaagagctgaactcatcgttgactctgctacacggtcaagtgatggtggagttcaacaatacaaaccatactgtacaagtgggtgaagagatttccattccatccaatgacactcatgtggtgtacactgtgtctgacacaccttcatgctggatgtacgtgttcactaacatgaccgagtggaacaacgaaactataaggaactggatactacatccggaaacgatgcctacaaggcaggaaaaaatgtcaagcaaaaacctaaccgcgttagaaaactttaaatttttcgccatggagaagtacttcgtatttcgtcaaagttttatcaacatgtattatgcactggcccatttgactcttgggattgaacagccattcgaggacgaagaggattacggcgattctactgaacaggagcctggggacgaagcaaaccagagtacggatgatggagacaccgcaccgaatgatgacgacacagatcacgtgcaaggaaacggggaagcacgtgatcaaggaactgactcgagggctcatccacaaggaaaagagcatgaaaaacaagaactgtaa

Transcript

evm.model.Ap9.209

ATGGGCAAAAAAGGCACAATGAAGGAAGACAAGACAAGTCAGTCATCCATGGCTCAGTCCAGCTTATGGAATAAATTCTTACTTTTCATGACATCACCAGTTGATCCATCAAACCTTGGTGTATTAAGAATTTTATTTGGATTGCTAATGATTATTGATATTCCTCAAGAACGTGGCATGCTATACATTGAAAGACATTTTGGTGAAGAAACTTGCCACTTCCCACTTTTCAACTTTGTTCAACCTCTGTCAGTCGACTGGATGCATGTCGTGTACCTTGTCATGTTTCTTGGGGCCCTTGGGATCTTTCTTGGATTTAAGTTTCGTTTTAGCTGTTTGATGTTCATGGTGACATATTGGTACGTTTTTATGTTGGAGAAGGCACGATGGAACAATCATTCATACTTGTATGGATTGTTTTCAGTGATGCTTCTTATGACTGATGCTAACCGCTACTGGTCTTTGGATGGAATATTTAATCCTGAATTAAAGAATTCTCATGTACCAAAGTGGAACTATGTTTTGCTACGTTTTCAGATTTTTCTGGTATACTTTTATGCTGGAATAAAGAAGATTGACATGGATTGGATGACAGGATATTCCATGACAGGACTGTCCCGTGCATGGGTGTTTGATCCGTTCCGATTTTTTCTAAGCAATGAACAAATTGACCTCTTTCTTGTACACATTGCAGGGTTAATGTTTGACCTGTCAGAGGGTTTTCTTCTCGTTTTTGAAAAGACACGCCCCATTGGAATATTATTTGGTGCCATGTTCCATGGCATGAATTCCCAGATGTTTCACATTGGCATGTTCCCGTACGCCATGCTGGCCACGTTACCTTTATTTTGCGCATACAACTGGCCTAAGAAAGTGTTTTCATGCTTGCCGAGCTTCAGCTCCAAGATTTTGCCATCACAAGCTGAACCACAAGCTAGTGAACATTGTGTGTACCCAGAAGCTGTCAAGGTTCCAGAGAGTGATAAGAACAAGAGTGGTAAAACAAAAACGTCAAAGAAATGTCGAACACCAACAGCCAAGCAGACGGCTGTAGTGTGCGTCATGCTTCTTTACATTGGTGTTCAGCTGTTTCTTCCATACTCACACTTTATTACTAAGGGTTATAATGCGTGGACCCAAGGTCTGTATGGCTACTCATGGGACATGATGGTACATTCCTGGAGTACTCAACACGTTAGGGTCAAAGTCGTGGATCGAGCGTCTGGAGAGGTCACTTATATAAGGCCCTCGGCGTGGTTAAGAGAGAAGCGGCAGTCACGTTGGAATTCACACCCAGACATGACCAAACAGTACATGACCTGCATGGCTGAGAAGCTCAAGGCTCGCACAGACCTCAACATAACTGATCCTGCTATCTACCTGGATGTGTGGCGCTCCATGAACAAGCGCTTTCAACAGCGCATGGTTGATCCCAGAGTGGACATGGTCACTGCGCCATGGTCGCCATTTAAACAGACACCTTGGGTTCAGCCCTTGCTGACGGAGCTGTCTCCGTGGCGCGAGAAAATGGTCCAGATTAGGGAGGAGCTGAAGGAGAAGTCCAATTTTAGTGCCATTACATTTGTGGCTGATTTTCCGGGTCTTTTCTTGGAAAATTATGTGGTTGAAGAGCTGAACTCATCGTTGACTCTGCTACACGGTCAAGTGATGGTGGAGTTCAACAATACAAACCATACTGTACAAGTGGGTGAAGAGATTTCCATTCCATCCAATGACACTCATGTGGTGTACACTGTGTCTGACACACCTTCATGCTGGATGTACGTGTTCACTAACATGACCGAGTGGAACAACGAAACTATAAGGAACTGGATACTACATCCGGAAACGATGCCTACAAGGCAGGAAAAAATGTCAAGCAAAAACCTAACCGCGTTAGAAAACTTTAAATTTTTCGCCATGGAGAAGTACTTCGTATTTCGTCAAAGTTTTATCAACATGTATTATGCACTGGCCCATTTGACTCTTGGGATTGAACAGCCATTCGAGGACGAAGAGGATTACGGCGATTCTACTGAACAGGAGCCTGGGGACGAAGCAAACCAGAGTACGGATGATGGAGACACCGCACCGAATGATGACGACACAGATCACGTGCAAGGAAACGGGGAAGCACGTGATCAAGGAACTGACTCGAGGGCTCATCCACAAGGAAAAGAGCATGAAAAACAAGAACTGTAA

Protein

Uniprot

Uniprot term	Description
Q9MYY3	Vitamin K-dependent gamma-carboxylase OS=Delphinapterus leucas OX=9749 GN=GGCX PE=2 SV=1
Q9QYC7	Vitamin K-dependent gamma-carboxylase OS=Mus musculus OX=10090 GN=Ggcx PE=1 SV=1
Q9GL59	Vitamin K-dependent gamma-carboxylase OS=Ovis aries OX=9940 GN=GGCX PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05090	VKG_Carbox	Vitamin K-dependent gamma-carboxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007782	Family	Vitamin K-dependent gamma-carboxylase	Interproscan
IPR011051	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR011020	Domain	HTTM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12639	VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008488	Molecular Function	gamma-glutamyl carboxylase activity	Interproscan
GO:0017187	Biological Process	peptidyl-glutamic acid carboxylation	Interproscan
GO:0019842	Molecular Function	vitamin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10106	GGCX; vitamin K-dependent gamma-carboxylase	EC:4.1.1.90	Ubiquinone and other terpenoid-quinone biosynthesis	ko00130	deepkoala