Gene detail

Detailed information of evm.model.Ap9.2479 in Astrangia poculata

Genomic Location: Ap9:26755058...26757860
NR annotation: KAJ7382837.1, hypothetical protein OS493_032473 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8IWV2	Contactin-4 OS=Homo sapiens OX=9606 GN=CNTN4 PE=1 SV=1
Q62845	Contactin-4 OS=Rattus norvegicus OX=10116 GN=Cntn4 PE=1 SV=1
Q69Z26	Contactin-4 OS=Mus musculus OX=10090 GN=Cntn4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan