Genomic Location: Ap9:26770148...26783485
NR annotation: KAJ7382837.1, hypothetical protein OS493_032473 [Desmophyllum pertusum]
| CDS | |||||
| evm.model.Ap9.2481 | |||||
| Transcript |
| evm.model.Ap9.2481 |
| Protein |
| evm.model.Ap9.2481 |
| Uniprot term | Description |
|---|---|
| P68500 | Contactin-5 OS=Mus musculus OX=10090 GN=Cntn5 PE=1 SV=2 |
| P97527 | Contactin-5 OS=Rattus norvegicus OX=10116 GN=Cntn5 PE=1 SV=1 |
| Q90W79 | Contactin-5 OS=Gallus gallus OX=9031 GN=CNTN5 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF01410 | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10075 | BASIGIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0007411 | Biological Process | axon guidance | Interproscan |
| GO:0030424 | Cellular Component | axon | Interproscan |
| GO:0070593 | Biological Process | dendrite self-avoidance | Interproscan |
| GO:0098632 | Molecular Function | cell-cell adhesion mediator activity | Interproscan |
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19719 | COL2A; collagen type II alpha | - | Glycosaminoglycan binding proteins | ko00536 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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