Detailed information of evm.model.Ap9.2752 in Astrangia poculata

Genomic Location: Ap9:29680331...29688943
NR annotation: XP_020623262.1, E3 ubiquitin-protein ligase RNF181-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6GPV5E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1
Q5M974E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 SV=1
Q91YL2E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10046BLOC1_2Biogenesis of lysosome-related organelles complex-1 subunit 2 Coiled-coilInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019269FamilyBiogenesis of lysosome-related organelles complex-1, subunit 2Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

TOP