Detailed information of evm.model.Ap9.399 in Astrangia poculata

Genomic Location: Ap9:4304939...4323405
NR annotation: KAJ7371490.1, NPC intracellular cholesterol transporter 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35604NPC intracellular cholesterol transporter 1 OS=Mus musculus OX=10090 GN=Npc1 PE=1 SV=2
O15118NPC intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1 PE=1 SV=2
P56941NPC intracellular cholesterol transporter 1 OS=Sus scrofa OX=9823 GN=NPC1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02460PatchedPatched familyFamilyInterproscan
PF12349Sterol-sensingSterol-sensing domain of SREBP cleavage-activationFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000731DomainSterol-sensing domainInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015918Biological Processsterol transportInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12385NPC1; Niemann-Pick C1 protein-Transportersko02000deepkoala

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