Detailed information of evm.model.Ap9.757 in Astrangia poculata

Genomic Location: Ap9:8036194...8052635
NR annotation: XP_027047072.1, microfibril-associated glycoprotein 4-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92752Tenascin-R OS=Homo sapiens OX=9606 GN=TNR PE=1 SV=3
Q8BYI9Tenascin-R OS=Mus musculus OX=10090 GN=Tnr PE=1 SV=2
Q0P4P2Fibrinogen C domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=fibcd1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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