Detailed information of evm.model.Ap9.996 in Astrangia poculata

Genomic Location: Ap9:10640067...10649726
NR annotation: RMX54001.1, hypothetical protein pdam_00014889 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K409DNA polymerase beta OS=Mus musculus OX=10090 GN=Polb PE=1 SV=3
P06766DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4
Q27958DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR019843Binding_siteDNA polymerase family X, binding siteInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan

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