Detailed information of evm.model.Chr01.1052 in Hemicorallium imperiale

Genomic Location: Chr01:28276055...28301279
NR annotation: XP_028401348.1, E3 ubiquitin-protein ligase SH3RF1-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8TEJ3E3 ubiquitin-protein ligase SH3RF3 OS=Homo sapiens OX=9606 GN=SH3RF3 PE=1 SV=2
Q8C120E3 ubiquitin-protein ligase SH3RF3 OS=Mus musculus OX=10090 GN=Sh3rf3 PE=1 SV=2
Q7Z6J0E3 ubiquitin-protein ligase SH3RF1 OS=Homo sapiens OX=9606 GN=SH3RF1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR050384FamilyEndophilin/SH3RFInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14167SH3 DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12171SH3RF, POSH; E3 ubiquitin-protein ligase SH3RFEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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