Detailed information of evm.model.Chr01.118 in Hemicorallium imperiale

Genomic Location: Chr01:2282665...2301702
NR annotation: CAB3979325.1, zinc finger BED domain-containing 1-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.118 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O96006E3 SUMO-protein ligase ZBED1 OS=Homo sapiens OX=9606 GN=ZBED1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000431 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02892
all species →		zf-BEDBED zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR003656
all species →		DomainZinc finger, BED-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR052035
all species →		FamilyZinc finger BED domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481
all species →		ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.118.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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