Detailed information of evm.model.Chr01.1290 in Hemicorallium imperiale

Genomic Location: Chr01:35785730...35819064
NR annotation: XP_038057262.1, endoglucanase 4-like [Patiria miniata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.1290 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P26221Endoglucanase E-4 OS=Thermobifida fusca OX=2021 GN=celD PE=1 SV=2
P28622Endoglucanase 4 OS=Bacillus sp. (strain KSM-522) OX=120046 PE=3 SV=2
P26225Endoglucanase B OS=Cellulomonas fimi OX=1708 GN=cenB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002174 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00553
all species →		CBM_2Cellulose binding domainDomainInterproscan
PF00759
all species →		Glyco_hydro_9Glycosyl hydrolase family 9RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008928
all species →		Homologous_superfamilySix-hairpin glycosidase superfamilyInterproscan
IPR012291
all species →		Homologous_superfamilyCBM2, carbohydrate-binding domain superfamilyInterproscan
IPR001919
all species →		DomainCarbohydrate-binding type-2 domainInterproscan
IPR008965
all species →		Homologous_superfamilyCBM2/CBM3, carbohydrate-binding domain superfamilyInterproscan
IPR001701
all species →		DomainGlycoside hydrolase family 9Interproscan
IPR012341
all species →		Homologous_superfamilySix-hairpin glycosidase-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22298
all species →		ENDO-1,4-BETA-GLUCANASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0030247
all species →		Molecular Functionpolysaccharide bindingInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.1290.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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