Detailed information of evm.model.Chr01.159 in Hemicorallium imperiale

Genomic Location: Chr01:3352804...3417220
NR annotation: XP_028397929.1, LOW QUALITY PROTEIN: TPR and ankyrin repeat-containing protein 1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.159 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BV79TPR and ankyrin repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Trank1 PE=2 SV=3
O15050TPR and ankyrin repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=TRANK1 PE=1 SV=4
O13797Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sgt2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000890 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00580
all species →		UvrD-helicaseUvrD/REP helicase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014016
all species →		DomainUvrD-like helicase, ATP-binding domainInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR039904
all species →		FamilyTPR and ankyrin repeat-containing protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21529
all species →		MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.159.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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