Detailed information of evm.model.Chr01.1726 in Hemicorallium imperiale

Genomic Location: Chr01:45047129...45063603
NR annotation: CAB4043729.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.1726 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P31648Sodium- and chloride-dependent GABA transporter 1 OS=Mus musculus OX=10090 GN=Slc6a1 PE=1 SV=2
P23978Sodium- and chloride-dependent GABA transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc6a1 PE=1 SV=1
P48057Sodium- and chloride-dependent GABA transporter 1 OS=Mus cookii OX=10098 GN=Slc6a1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000411 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00209
all species →
SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF13843
all species →
DDE_Tnp_1_7Transposase IS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000175
all species →
FamilySodium:neurotransmitter symporterInterproscan
IPR037272
all species →
Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR029526
all species →
DomainPiggyBac transposable element-derived proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47272
all species →
DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.1726.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP