Detailed information of evm.model.Chr01.174 in Hemicorallium imperiale

Genomic Location: Chr01:3731816...3766686
NR annotation: XP_028397692.1, liprin-beta-2-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.174 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C8U0Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3
Q86W92Liprin-beta-1 OS=Homo sapiens OX=9606 GN=PPFIBP1 PE=1 SV=2
O35711Liprin-beta-2 OS=Mus musculus OX=10090 GN=Ppfibp2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003825 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07647
all species →		SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF00536
all species →		SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037618
all species →		DomainLiprin-beta, SAM domain repeat 2Interproscan
IPR029515
all species →		FamilyLAR-interacting protein, LiprinInterproscan
IPR001660
all species →		DomainSterile alpha motif domainInterproscan
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12587
all species →		LAR INTERACTING PROTEIN LIP -RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007528
all species →		Biological Processneuromuscular junction developmentInterproscan
GO:0048786
all species →		Cellular Componentpresynaptic active zoneInterproscan
GO:0050808
all species →		Biological Processsynapse organizationInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K27096PPFIBP; liprin-beta-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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