Gene detail

Detailed information of evm.model.Chr01.186 in Hemicorallium imperiale

Genomic Location: Chr01:4254242...4288019
NR annotation: XP_028397434.1, arginine--tRNA ligase, cytoplasmic-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6P1S4	Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=rars1 PE=2 SV=1
P37880	Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus OX=10029 GN=RARS1 PE=2 SV=1
P40329	Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03485	Arg_tRNA_synt_N	Arginyl tRNA synthetase N terminal domain	Domain	Interproscan
PF00750	tRNA-synt_1d	tRNA synthetases class I (R)	Family	Interproscan
PF05746	DALR_1	DALR anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001278	Family	Arginine-tRNA ligase	Interproscan
IPR036695	Homologous_superfamily	Arginyl tRNA synthetase N-terminal domain superfamily	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR005148	Domain	Arginyl tRNA synthetase N-terminal domain	Interproscan
IPR035684	Domain	Arginyl-tRNA synthetase, catalytic core domain	Interproscan
IPR008909	Domain	DALR anticodon binding	Interproscan
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11956	ARGINYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004814	Molecular Function	arginine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006420	Biological Process	arginyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01887	RARS, argS; arginyl-tRNA synthetase	EC:6.1.1.19	Mitochondrial biogenesis	ko03029	deepkoala