Gene detail

Detailed information of evm.model.Chr01.199 in Hemicorallium imperiale

Genomic Location: Chr01:4608191...4609783
NR annotation: CAB4024311.1, transcriptional adapter 2-alpha [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr01.199 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SZP8	Transcriptional adapter 2-alpha OS=Bos taurus OX=9913 GN=TADA2A PE=2 SV=1
Q6AYE3	Transcriptional adapter 2-alpha OS=Rattus norvegicus OX=10116 GN=Tada2a PE=2 SV=1
O75478	Transcriptional adapter 2-alpha OS=Homo sapiens OX=9606 GN=TADA2A PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006289 (this species only)
Transcription factor family	MYB · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan
PF04433 all species →	SWIRM	SWIRM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR043145 all species →	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR000433 all species →	Domain	Zinc finger, ZZ-type	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017930 all species →	Domain	Myb domain	Interproscan
IPR007526 all species →	Domain	SWIRM domain	Interproscan
IPR016827 all species →	Family	Transcriptional adaptor 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12374 all species →	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0070461 all species →	Cellular Component	SAGA-type complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11314	TADA2A, ADA2; transcriptional adapter 2-alpha	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.