Detailed information of evm.model.Chr01.223_evm.model.Chr01.225 in Hemicorallium imperiale

Genomic Location: Chr01:5119182...5146359
NR annotation: XP_028397763.1, transcription initiation factor TFIID subunit 7-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.223_evm.model.Chr01.225 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6R1L1Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1
Q2HJG8Transcription initiation factor TFIID subunit 7 OS=Bos taurus OX=9913 GN=TAF7 PE=2 SV=1
Q15545Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005564 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04658
all species →		TAFII55_NTAFII55 protein conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006751
all species →		DomainTAFII55 protein, conserved regionInterproscan
IPR037817
all species →		FamilyTranscription initiation factor TFIID subunit 7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12228
all species →		TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0051123
all species →		Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03132TAF7; transcription initiation factor TFIID subunit 7-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP