Detailed information of evm.model.Chr01.2833 in Hemicorallium imperiale

Genomic Location: Chr01:63340170...63346756
NR annotation: CAB3991045.1, hypothetical protein RhiirA4_509111 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.2833 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9SB51Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana OX=3702 GN=UBP16 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000538 (this species only)
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF10551
all species →		MULEMULE transposase domainDomainInterproscan
PF02902
all species →		Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR007527
all species →		DomainZinc finger, SWIM-typeInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR018200
all species →		Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR018289
all species →		DomainMULE transposase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35385
all species →		PROTEIN B, PUTATIVE-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.2833.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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